تک 20 - پرتال اموزشی و تفریحی
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تک 20 پرتال اموزشی و تفریحی

تک 20 پرتال اموزشی و تفریحی  * ابسان الکتریک ۷۰ - ساندویچ پانل دیواری ماموت پانل دلیجان 09186436863

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2) If you would like to submit a specific link or to notify us of a modified link,please send us an email, but remember that we reserve the right to choose the links we want to include !
3) Links to protein sequence, 3D structure and 2D-gel analytical tools are provided on ExPASy's Proteomics tools page.

Quick jump to the following topics:
Protein db | 3D structure db | 2D-PAGE & MS db | DNA/RNA db | Carbohydrates db | Organisms specific db | Human mutation db | Genes/proteins specific db | PTM db | Phylogenetics db | Microarrays db | Patents | References | Dict., protocols & nomenclat. | Biol. soft. & db catalogs | Gateways | Biol. journals & publishers | Biol. societies | Biocomputing servers | Biotech. companies | Bioinformatics companies | Misc. medical ref. sites | Misc. scientific ref. sites

Protein related databases
  • UniProt - the universal protein resource
  • UniProt Knowledgebase - consists of UniProtKB/Swiss-Prot (high-level annotation) and UniProtKB/TrEMBL (computer-annotated)
  • PMD - Protein Mutant db

  • InterPro - Integrated Resources of Proteins Domains and Functional Sites
  • PROSITE - Database of protein families and domains
  • BLOCKS - BLOCKS db
  • Gene3D - Structural and Functional Annotation of Protein Families
  • Panther - Functional classification system
  • Pfam - Protein families db (HMM derived) [Mirrors at St. Louis (USA), Sanger Institute, UK, Karolinska Institutet (Sweden)]
  • PIRSF - Protein classification system
  • PRINTS - Protein Motif fingerprint db
  • ProDom - Protein domain db (Automatically generated)
  • PROTOMAP - An automatic hierarchical classification of UniProtKB/Swiss-Prot proteins
  • SBASE - SBASE domain db
  • SMART - Simple Modular Architecture Research Tool
  • Superfamily - Library of profile HMMs representing all proteins of known structure
  • STRING - Search Tool for the Retrieval of Interacting Genes/Proteins
  • TIGRFAMs - TIGR protein families db

  • BIND - Biomolecular Interaction Network Database
  • DIP - Database of Interacting Proteins
  • MINT - Molecular INTeraction database
  • HPRD - Human Protein Reference Database
  • IntAct
  • BioGRID - General Repository for Interaction Dataset
  • PPI - JCB Protein-Protein Interaction Website
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Protein 3D structure related databases
  • PDB - Protein Data Bank
  • BioMagResBank - Repository for data on proteins, peptides, and nucleic acids from NMR spectroscopy
  • SWISS-MODEL Repository - Automatically generated protein models db
  • ModBase - Db of comparative protein structure models
  • CATH - UCL BSM structural classification of proteins
  • SCOP - Structural classification of proteins [Mirror at USA | Israel | Singapore | Australia]
  • Molecules To Go - Molecules To Go (formerly known as Molecules R Us), browser for PDB
  • BMM Domain Server - Biomolecular Modelling Laboratory (ICRF) protein domain server
  • ReLiBase - Receptor/ligand complexes db [Mirror in USA]
  • TOPS - Protein topology atlas
  • CCDC - Cambridge Crystallographic Data Center (Cambridge Stuctural Db (CSD))
  • HSSP - Homology-derived secondary structure of proteins db
  • MutaProt - Comparison of PDB files which differ by point mutations

  • SWISS-3DIMAGE - 3D images of proteins and other biological macromolecules
  • BioImage - Biological image db (contains imaging data on macromolecules)
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Proteomics databases and links
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Nucleotide and related databases
  • EMBL - EMBL Nucleotide sequence db (EBI)
  • Genbank - GenBank Nucleotide Sequence db (NCBI)
  • DDBJ - DNA Data Bank of Japan
  • dbEST - dbEST (Expressed Sequence Tags) db (NCBI)
  • dbSTS - dbSTS (Sequence Tagged Sites) db (NCBI)

  • AsDb - Aberrant Splicing db
  • ACUTS - Ancient conserved untranslated DNA sequences db
  • Codon Usage Db
  • EPD - Eukaryotic Promoter db
  • HOVERGEN - Homologous Vertebrate Genes db
  • IMGT - ImMunoGeneTics db [Mirror at EBI]
  • ISIS - Intron Sequence and Information System
  • RDP - Ribosomal db Project
  • gRNAs db - Guide RNA db
  • PLACE - Plant cis-acting regulatory DNA elements db
  • PlantCARE - Plant cis-acting regulatory DNA elements db
  • ssu rRNA - Small ribosomal subunit at the European ribosomal RNA database
  • lsu rRNA - Large ribosomal subunit at the European ribosomal RNA database
  • 5S rRNA - 5S ribosomal RNA db
  • tmRNA Website
  • tmRDB - tmRNA dB
  • tRNA - tRNA compilation from the University of Bayreuth
  • uRNA db
  • RNA editing - RNA editing site
  • RNAmod db - RNA modification db
  • TelDB - Multimedia Telomere Resource

  • MPDB - Molecular probe db
  • VectorDB - Vector sequence db
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Carbohydrates resources
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Species specific databases:
Human
Vertebrates
Mitochondrion and chloroplast
  • GOBASE - Organelle Genome Database
  • MitoDat - Mendelian Inheritance and the Mitochondrion db (mitochondrial nuclear gen

  • C.caldarium - Cyanidium caldarium strain RK1 chloroplast genome
Insects
Invertebrates
Plants
Fungi
Bacteria
Archaea
Viruses and phages
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Human mutation databases/resources
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Gene(s)/protein(s) specific databases/resources
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Post-translational modifications databases and resources
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Phylogenetics and taxonomy databases & resources
  • COG - Phylogenetic classification of proteins encoded in complete genomes
  • EGO - Eukaryotic Gene Orthologs
  • InParanoid - Eukaryotic ortholog groups
  • Metazome - Phylogenomic analysis of metazoan gene families
  • OMA - Orthologs Matrix Project (OMA)
  • TreeBASE - Relational db of phylogenetic information
  • TreeFam - Tree families database of phylogenetic trees of animal genes
  • The Tree of life - Collection of WWW pages on phylogeny and biodiversity of organisms
  • The PhylOgenetic Web Repeater (POWER) - perform phylogenetic analysis
  • NCBI Taxonomy Browser
  • NEWT - UniProt Taxonomy Browser

  • CluSTr - Automatic classification of UniProtKB proteins into groups of related proteins
  • ProtoNet - Classification of the proteins into hierarchical clusters
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Microarray databases and resources
  • ArrayExpress - MicroArray informatics at the EBI
  • CleanEx - database of gene expression profilesnew
  • ExpressDB - Yeast and E.coli RNA expression db
  • GeneX - Gene Expression project
  • GEO - Gene Expression Omnibus
  • RAD - RNA abundance db
  • SMD - Stanford microarray db

  • MILANO - Microarray Literature-based Annotation
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Patents databases
  • DPD - DNA Patent db
  • Ag Patents - Agricultural Biotechnology patents from the USDA

  • USPTO patent db - USA Patent and Trademark Office patent db
  • Esp@cenet - Patent information database from the European Patent Office (worldwide coverage)
  • Freepatentsonline - access to millions of patents
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References (bibliographic databases)
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Dictionaries, protocols, courses, nomenclature, etc.
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Biological software and databases catalog servers
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Gateways (portals) to Life Science resources
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Biological journals and publishers
Resources linking to journals home pages
Publishers
Bioinformatics journals and newsletters
Genomic newsletters
Miscellaneous
Biotechnology trade journals
General science journals
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Some biological societies and organizations
  • APS - American Peptide Society
  • ASCB - The American Society for Cell Biology
  • ASHG - American Society of Human Genetics
  • ATCC - American Type Culture Collection
  • Biochemical Society
  • BSA - Botanical Society of America
  • CSBMCB - Canadian Society of Biochemistry and Molecular and Cell Biology
  • EFBF - European Federation of Biophysics
  • EGF - European Genetics Foundation
  • EMBO - European Molecular Biology Organization
  • ESEB - European Society for Evolutionary Biology
  • ESHG - European Society of Human Genetics
  • FAOBMB - Federation of Asian and Oceanian Biochemists and Molecular Biologists
  • FASEB - Federation of American Societies for Experimental Biology
  • FEBS - Federation of European Biochemistry Societies
  • HUGO - HUman Genome Organization
  • HUPO - HUman Proteome Organization
  • IUBMB - International Union of Biochemistry and Molecular Biology
  • IUPAC - International Union of Pure and Applied Chemistry
  • MSA - Mycological Society of America
  • PPI - Plasma Proteome Institute
  • PRF - Protein Research Foundation
  • SDB - Society for Developmental Biology
  • SGM - Society for General Microbiology
  • SICB - Society for Integrative and Comparative Biology

  • DOI - Digital Object Identifier foundation

  • BioJava Project - International association of developers of Java tools for bioinformatics
  • Bioperl Project - International association of developers of Perl tools for bioinformatics
  • Biopython Project - International association of developers of Python tools for bioinformatics
  • ISCB - International Society for Computational Biology
  • OMG LSR - Object Management Group Life Science Research task force
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تک 20 - پرتال اموزشی و تفریحی